Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792530.1_cds_XP_016512713.1_2454
CDS Infomation

[gene=LOC107829755] [db_xref=GeneID:107829755] [protein=protein NRT1/ PTR FAMILY 4.4-like] [protein_id=XP_016512713.1] [location=complement(join(239148..240015,240728..240873,241802..242242,242784..243001,243411..243564))] [gbkey=CDS]
Sequence

ATGGATAGGGAAGAGACAAGAAAGAATAAGTTGATCAAAAGGGAATCTGTTGTGTCTATG
GGTACTGCAACAGAGCAAGCCTCTGTTGATTGGAGAGGAAGACCTTGCAAACCAAACAAA
CATGGTGGCATGACTGCTGCTATCTTTGTATTGTGCCTTCAGGCATTCGAAATGATGGGC
ATTGCCGCTGTTGGAAATAATCTAATAACCTATGTCTTCAATGAGATGCACTTCCCTCTC
TCAAAGTCCGCTAACATAGTCACAAATTTCATTGGAACTGTTTTCCTCCTCTCCCTTTTT
GGTGGCTTTCTCTCCGATTCTTATCTTGGCAGCTTCTTGACTATGTTGATCTTTGGCTTT
GTCGAACTCTCTGGGTTTATTCTATTGGCAGTGCAAGCACATGTTCCACAGCTAAGGCCG
CCAAAGTGTGACATGATGTTAAGCAAAGGGCAGTGCATGGAAGCAAAGGGATATAAGGCT
ATGATCTTTTTTGTTGCACTCTACTTGGTTGCTTTAGGCAGTGGCTCTTTAAAACCTAAT
ATAATCTCACAGGGTGCTGACCAATTCAAGAAAGATGATTCCAAGCAATCCAAGAAGCTA
TCTACTTACTTCAACTTTGCCTATTTTGCTTTTTGTACTGGGGAACTTGTTGCTCTAACT
CTTCTTGTTTGGGTGCAAACTCACTACGGAATGGACGTCGGATTCGGGGTTTCTGCAGCT
GCAATGGCCCTTGGATTGATCAGTTTGCTTTGTGGAACAGTTCTTTATAGGAACACACCA
CCTCGAGGAAGTATATTCACACCAATTGCCCAAGTGTTTGTGGCTGCAATCACAAAAAGA
AAGCAGATTTGTCCATCAAATCTGGAGATGCTTCATGGAAGCCAATTCATTGCGCCCCAA
CAAAACCTTTCTGGCATGGCATCAAAAGGCAGCACTCTCATCCATACGGATAAGTTCAGG
TTCTTAGACAAGGCGTGTATCAAAAAACAAGATGGAAGTAGTACAAGTGAAAGCCCCTGG
AGACTATGCACAGTGTCTCAAGTGGAGCAAGTAAAAATACTAATCTCAGTTGTTCCAATC
TTCGCTTGCACCATAATCTTCAACACAATTCTAGCTCAGCTCCAGACCTTCTCAGTCCAA
CAAGGAACTACAATGAACACTCGCCTCGCGCACAACTTCAAAATCCCTCCAGCTTCCCTT
CAGGCCATACCTTACATTATGCTTATATTTTTGGTCCCTCTGTACGAAATCGCGTTTGTC
CCCATGACCCGAAAGTTCACTGGCAAAGATTCAGGAATCACGCCTTTACAAAGAGTTGGC
ATTGGCCTTTTCATCGCGACATTCTCTATGGTCTGCGCTGCTCTAGTTGAGAATAAAAGA
AGAAACTATGCCCTGAACCAGAACAGGACACTGTCCATTTTCTGGATAGCTCCACAGTTT
CTAATTTTCGGCCTGTCGGAGATGTTCACTGCTGTTGGACTTATTGAGTTCTTCTACAAA
CAATCATTGGAAGGGATGCAATCTTTTTTGACGGCCATGACCTATTGTTCCTATTCATTT
GGATTTTATTTGAGCTCTTTGTTGGTTTCTTTGGTTAACAAAATAACGTCTAGTTCATCA
TCAGGATCAGGTGGATGGCTAAATGACAATGACCTCAACAAGGATAGGCTAGATCTTTTC
TATTGGCTGTTGGCTGCTCTTAGCCTAGTCAACTTCATTAATTATCTATTCTGTTCCAGA
TGGTATTCTTATAATCCATCTCTGTTACCTGTTGTCACACTGCATGAGCCACAACCACAA
GGACATGACCCTGAGAACCCAAATTGA

Peptide Sequence

PEP ID

XP_016512713.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 4.4-like [Nicotiana tabacum]
Sequence

MDREETRKNKLIKRESVVSMGTATEQASVDWRGRPCKPNKHGGMTAAIFVLCLQAFEMMG
IAAVGNNLITYVFNEMHFPLSKSANIVTNFIGTVFLLSLFGGFLSDSYLGSFLTMLIFGF
VELSGFILLAVQAHVPQLRPPKCDMMLSKGQCMEAKGYKAMIFFVALYLVALGSGSLKPN
IISQGADQFKKDDSKQSKKLSTYFNFAYFAFCTGELVALTLLVWVQTHYGMDVGFGVSAA
AMALGLISLLCGTVLYRNTPPRGSIFTPIAQVFVAAITKRKQICPSNLEMLHGSQFIAPQ
QNLSGMASKGSTLIHTDKFRFLDKACIKKQDGSSTSESPWRLCTVSQVEQVKILISVVPI
FACTIIFNTILAQLQTFSVQQGTTMNTRLAHNFKIPPASLQAIPYIMLIFLVPLYEIAFV
PMTRKFTGKDSGITPLQRVGIGLFIATFSMVCAALVENKRRNYALNQNRTLSIFWIAPQF
LIFGLSEMFTAVGLIEFFYKQSLEGMQSFLTAMTYCSYSFGFYLSSLLVSLVNKITSSSS
SGSGGWLNDNDLNKDRLDLFYWLLAALSLVNFINYLFCSRWYSYNPSLLPVVTLHEPQPQ
GHDPENPN

Transcript Sequence

Gene sequence data has not been registered.